Continuity mistake: After he gets his powers back, Flash takes off to try and time jump with speed. He fails and trips, sliding to a grinding stop out in the open desert. The shot from the side of him on the ground shows him lying on rolling "sand waves" and looks rather smooth with no vegetation around him except some cacti in the distance. The shot then cuts to an over head view as he sits up and starts to weep in desperation. Suddenly the rolling sand is now a dried cracked dirt and there are bushes and more cacti around him. (00:43:10)
Chosen answer: He probably turned her over to the police. There's no knowing how much time passed between when he caught her and when he jumped on the roof to chat with Batman.
Casual Person