Continuity mistake: When Sam is in his bedroom, after he finds the Cube sliver it falls and dramatically burns a hole through the floor into the kitchen. But Sam's bedroom is over the living room (there is nothing on the ground floor below Sam's elevated bathroom, and in the first movie Jazz hides in this open space), and the kitchen is actually located between the den and dining room, at the other end of the house. If they were to follow the actual floor plan of the house, the Cube sliver would have landed in the area of the piano in the living room, but where would the fun have been in that? (00:12:30)
Factual error: It is barely credible that a young Victorian woman like Elena would even think about wearing a goatskin miniskirt - exposing her legs in those days would be akin to walking about topless nowadays. Even if she did those bright yellow cotton knickers - gleefully visible in the scene in the beehive - are in no way from the 1860s. Her pants are a hundred years ahead of their time.
Factual error: When Ray leaves his wife Gina and his car is hit by the truck he should still be in England, but when he is being chased through the streets he is in South Africa, the cops in the car are not in English police uniforms or vehicle, police livery is incorrect, and all vehicles have South Africa plates, not English number plates.
Factual error: Amongst the essential parts of a nuclear weapon's detonation mechanism is a radioactive isotope of tritium, which has a half life of just 12 1/2 years. The tritium in every nuke on earth has to be replaced every ten years or so. This is by no means unusual; there are other perishable parts including detonators made of conventional explosives which would be completely inert after a thousand years. After lying dormant with no maintenance at all for that amount of time the nuclear weapons the 'Man-animals' find would be big shiny paperweights and not much else.
Continuity mistake: In the beginning, when Anderton arrests the jealous husband, he notes that he is being arrested on April 22 - that day - for the future murder of his wife and her lover. Later, while Anderton is jogging, we see billboards advocating a "Yes" vote on pre-crime on April 22. The next day, Anderton's boss Lamar notes that the vote is in a week, which would make it April 15, making the day that the jealous husband was arrested April 14, not April 22. (00:13:05 - 00:15:15)
Continuity mistake: In the end, when the President is visited by the X-Men, he receives a blue binder, which is laid in front of him on the table. When they have left, you see a shot including the President's desk, and you can see that the only thing he has on the table are some sheets of paper, stapled in the upper left corner, opened up. Then the shot changes to a close-up of the President, and then back again, and you see the blue binder in front of him, closed, and the papers have disappeared. (02:01:40)
Revealing mistake: In the swimming pool scene, when David is sitting at the bottom of the pool, you can clearly see a scab on one of his knees. (00:43:00)
Factual error: Fitch, who professes qualifications in biology, genetics and biochemistry, says that they made Sil female because she's a natural predator and so she'd be more docile. He should retake his finals. In every single species of predator on earth - every single one - the females are the hunters, aggressors and killers. The males may be socially dominant but they are the 'docile' ones. There are no exceptions - and no human DNA was used to create Sil - they used synthetic DNA based on the instructions transmitted to them.
Factual error: Trevor - a Professor of Geology - boasts about having an article published in Scientific American, and that is not something any scientist would do. Scientific American is looked upon with slight disdain by the scientific community, considered to be a populist crowd pleaser. It is not even peer reviewed. Considering that he has just turned the geological and archaeological worlds on their heads he would have been better off publishing in Journal of Geological Research or Geology, both prestigious professional journals.
Factual error: Though extremely modest on today's standards, the dress worn by Clara to the hoedown shows far too much cleavage for the time. No schoolteacher would ever wear a dress like that in the 1880s.
Audio problem: After the aeroplane crashed, a dinosaur stepped over it and the windows shattered making the typical sound of made-of-glass things when broken. They are made of plexiglass (a sort of fibrous plastic).
Continuity mistake: When Norman is getting ready to test himself, he lies down on the bed, fastens himself in and the doctor goes to the computer. However, when it shows him being brought in to the chamber he has several electrodes connected to his chest and head. (00:15:20)
Continuity mistake: In the exterior front shots of Elliott's house there are some significant changes to the landscape in different shots. For instance, the two lampposts at the bottom of the driveway change to an entirely different style in some shots, and the huge garden boulders repeatedly vanish and reappear. Also, note when Michael takes off on Elliott's bike to go search for ET, the in-ground lamppost that should be beside the mailbox has vanished, but it reappears when all the government agents are setting things up outside the house.
Factual error: Twice in the film it is made clear that the Pym particle works by reducing the space between atoms in order to shrink an object, and by increasing it to enlarge them. This means that the object will weigh the same, whether shrunk or enlarged - it cannot be otherwise. A 90kg man the size of an ant would punch a hole through any surface upon which he stood (and couldn't ride ants), Doctor Pym has been walking about with a 60 tonne tank in his pocket, Darren Cross lifts a full grown sheep between finger and thumb, and the supersized Thomas The Tank Engine would be far too light to crush the police car (in fact it would float harmlessly away as it would probably weigh less than the air it displaced).