Visible crew/equipment: During the scene where Neo is talking to Agent Smith in the park area where Neo was talking to the Oracle, there is a close-up on Agent Smith's face. In his sunglasses you can see a bright white screen to reflect the light onto the faces of the actors. This isn't visible in any non-reflected angles. You can also see the cameraman on the other side. (00:51:15)
Continuity mistake: There are missing boys in the movie. At the end of The Maze Runner, there are 8 boys that get out of the maze besides Teresa. At the beginning of Scorch Trials, only 7 get in the compound. When Thomas shows the stolen card to the others, there are 6 of them and they all escape with Teresa and Aris. When they get out the mall and enter the city, there are 5 of them besides Aris and Teresa. The last boy (called 'Jack' by cast and crew) dies in a deleted scene, the other two boys simply vanish without a trace or explanation.
Deliberate mistake: Leaven spends too much time thinking about if 645 and 372 are prime numbers to be believable. But she knows the factors of 649 and the result of 26 to the power of 3 almost immediately. Plus anyone with any maths knowledge whatsoever would know that any even number (or one divisible by 5) can't be prime, so 645 and 372 could be dismissed without even thinking about it.
Other mistake: There is a scene in which Piter DeVries is talking about the Landsraad (one of the governmental organizations in Dune). Twice he mispronounces the name, saying "Lansdraad" instead.
Plot hole: The "video history" of the crashed USAF ship makes it very clear that the planet is uninhabited when they "landed". I can understand how a race of apes develops - they had a bunch of them on board. I can understand how a race of humans develops - they are descendants of the original crew. What I don't understand is...where the heck did all the horses come from?
Plot hole: There is a barely credible explanation for the fact that a guest cannot be injured or killed by being shot in Westworld, but what about the vicious fistfight we see in the bar? People are injured or killed in bar brawls all the time, and this one was incredibly violent. How do they prevent guests from being injured or killed by the cutting and stabbing weapons we see in Medieval and Roman World? Guests are supposed to fight each other, not just robots - they cannot be 'programmed' to lose! Delos is going be sued into bankruptcy within a week of the first guest arriving. Quite apart from the legal position, think about the bad publicity! Who is going to pay the huge fees demanded by the parks owners when the media is constantly reporting on the guests who wound up dead or with life changing injuries?
Continuity mistake: Right after Bennett takes off in the plane, Claire throws a gun to Alice. Between the slow-motion shots, the gun switches position in mid-air before Alice catches it. In the shot of Claire throwing it, the barrel is facing to the right, meaning that it should be facing to the left in the shot of Alice catching it. But it still faces the right when she does. (00:58:30)
Factual error: During the scene where it shows people all over the world, just before the shuttles take off, it is daylight everywhere. It would actually be dark or near dark in parts of the world.
Continuity mistake: It was briefly stated in the second film that the T-Virus was created by Dr. Ashford to cure his daughter Angela and that the Red and White Queens were based on her. This movie contradicts that by suggesting that Dr. Marcus created the T-Virus to cure his daughter Alicia, and that the Red/White Queens were modeled after her. While the rest of the movie stays true to the continuity of the previous films, this rather obvious ret-con is still a major continuity gaff.
Continuity mistake: Mr. Furlong pushes Zeke into the fishing tank and it breaks, soaking him from head to toe with water. Moments later they are walking out and he is dry.
Continuity mistake: As the hand creature busts the shackles off Boris' legs in Lunar Max, you can see the bottoms of his pants over his metal prison boots. There are only a few folds and wrinkles over his left foot, and the pants over right foot are hardly wrinkled at all, or affected as the creature climbs up his right leg. But only a couple of seconds later, we see another shot of Boris' feet as the creature breaks off the metal sleeve of his arm, and suddenly his pants legs are very wrinkled. Boris was standing perfectly still the entire time. Boris' legs are also suddenly closer together. (00:03:35)
Visible crew/equipment: At the party towards the end, Sherman leaves and Carla comes after him. As she runs toward him, the battery pack slides down her leg.
Factual error: When Philby and Alexander are talking about Albert Einstein, Alexander mentions that Einstein is a patent clerk. The beginning of this movie takes place in the year 1899. Einstein was still in school and didn't become a patent clerk until 1902.
Other mistake: There is something drastically wrong with the design of the spherical 'Aries' moon shuttle. Some seats and many fixtures are 'upside down' relative to the up-down orientation of the shuttle itself, and we see loose food trays and equipment about the place as if this is routine. But - the shuttle is designed to land on the moon. What happens then? The moon has gravity, remember? There are going to be quite a few very disgruntled people dangling upside down like spiders, and there will be loose gear (and perhaps a stewardess or two) bouncing about all over the place. It is not a matter of stowing loose gear or lying flat on landing - some parts of the shuttle are upside down relative to others, which is why the stewardess has to do that famous 180 degree upside down walk. Whichever way you look at it the shuttle is going to encounter serious problems when it reaches a gravity well, which will occur whenever the engines are fired up, never mind landing on the moon.
Other mistake: At the end of the film when they arrive in NYC looking for the library, we know that they survived because they are inside with a roaring fire burning. But where is the smoke up above, as Jack Hall approaches? There must be a chimney, or else they would have all died of asphyxiation.
Revealing mistake: When the UFO makes the huge flash that knocks everyone in the cemetery down, one of the police officers kicks a tombstone as he falls and it wobbles back and forth. (00:13:35)