Continuity mistake: When Homer is shot at the hippie farm, he ends up with a flower in his head, stem first. But he put the flower in the gun barrel stem first, as well. From a shot at that close a range and that velocity, there's no way the flower could have turned around in mid-air.
Continuity mistake: When the Simpsons are on the raft going down the river in Africa they come to a fork and have a choice of going to the left, towards a sunny and nicer area or to the right where it is rainy and gloomy. As Homer tries to steer the raft to the left as he pulls his left arm out of the water and it is covered in leeches but in the next shot of him when we see the arm again the leeches are gone. No way to remove leeches that fast.
Continuity mistake: When the school bus drops off Bart and Milhouse at the Simpson house, Bart puts his backpack on frontwards and starts krumping. When he walks through The Front door, he is still wearing his backpack on his front. It then cuts to inside the house, and we still see him coming through the door, but the backpack is gone.