Plot hole: Anderton's wife gains entry into the jailhouse using her husband's eyeball - but he's already locked up inside, so his eye would not still have access to enter as it pleased. Any place anywhere that would have any sort of security system requiring anything from a simple passcode to a card key to a retinal scan, would immediately delete the user in such instances from all rights. And would also certainly report on any attempted use of such (retinal scan, pass code, whatever). (02:00:45)
Plot hole: There must be a lot of dumb scientists in Sebastian's lab. While defibrillating the invisible gorilla, (s)he becomes completely visible for a moment. However, not once do the scientists consider that applying a mild electrical shock to the system renders the invisible animal visible again - that electricity may be the key to the whole invisibility problem. They don't even comment upon the fact that the gorilla does become visible.
Plot hole: There is a barely credible explanation for the fact that a guest cannot be injured or killed by being shot in Westworld, but what about the vicious fistfight we see in the bar? People are injured or killed in bar brawls all the time, and this one was incredibly violent. How do they prevent guests from being injured or killed by the cutting and stabbing weapons we see in Medieval and Roman World? Guests are supposed to fight each other, not just robots - they cannot be 'programmed' to lose! Delos is going be sued into bankruptcy within a week of the first guest arriving. Quite apart from the legal position, think about the bad publicity! Who is going to pay the huge fees demanded by the parks owners when the media is constantly reporting on the guests who wound up dead or with life changing injuries?
Plot hole: The "death" of the three astronauts and the requirement to then fake the whole scenario of the failed mission was obviously unplanned - it came about because of an unexpected computer glitch which reported that they had burned up on reentry, causing a mad scramble to cover up the fake mission and kill the astronauts. Obviously it was planned to have the astronauts "return" to Earth as heroes after their supposed trip to Mars, maintaining their deception (under threat if necessary) for the rest of their lives. One problem. Every scientist on earth would be champing at the bit to get their hands on a sample of Martian rock. Samples would be worth billions, worth far more than Moon rocks are worth today. How was NASA going to explain they didn't have any? They could not possibly fake the rocks - Martian soil and rocks would have a number of identifiable characteristics that a smart first year college student could identify. Using Martian meteorites collected from the Earth's surface won't work, either - prolonged exposure to the Earth's atmosphere would leave tell tale weathering and chemical changes that would be instantly detectable. NASA have painted themselves into a corner and that is not something they would have failed to realise well in advance.
Plot hole: During the later parts of this movie there is much talk about 'continental displacement' and this appears to be happening in the film. The Earth's crust is falling apart because of the heating of the inner core, and all the cities seems to be falling apart since the ground can no longer hold them. When our cast finds themselves surprised to be already over China when they figured to be over the ocean, it is explained that Asia has actually moved from where it was. If this phenomenon is taking place globally, how come the monks in China don't seem to have been disturbed at all? In fact the bell the monk rings as the ocean approaches hasn't even been shaken. The arks are built in between the mountains, but the mountains are apparently fine. Shouldn't they be falling like the rest of the crust?
Plot hole: When Amidala and some of the clone troopers get blown out of the ship chasing Dooku, later the trooper approaches Amidala and asks about making their way back to the front lines, but Amidala says they should go to the hangar to help Obi-Wan and Anakin. How did she know about the hangar, having left the ship quite some time before it arrived at the final destination? (02:05:50)
Plot hole: The "video history" of the crashed USAF ship makes it very clear that the planet is uninhabited when they "landed". I can understand how a race of apes develops - they had a bunch of them on board. I can understand how a race of humans develops - they are descendants of the original crew. What I don't understand is...where the heck did all the horses come from?
Plot hole: In this movie Goblin was able to sneak up on Peter. But in the previous movies Peter was able to sense danger from quite a distance away; Green Goblin from a few blocks and the train barricade from over a mile.
Plot hole: Harry tells Doc Ock that in order to find Spider-Man he must find Peter first. Doc Ock finds Peter with Mary Jane in the cafe and throws a car through the window straight at them, then later throws Peter against a brick wall. Any normal person would've been killed instantly (or very badly injured), and Doc Ock doesn't yet know that Peter is Spider-Man. Given that Peter is his only lead on Spider-Man, it makes no sense that Doc Ock would try to kill him.
Plot hole: The whole problem with the teleporter occurs when fly DNA is mixed in with Seth Brundle's DNA, starting his transformation into the Brundlefly. Brundle is on a hiding to nothing from the word go, and the fly is irrelevant. Humans are a walking talking mass of foreign DNA - we are host to one trillion bacteria all of which has a complete complement of DNA, as do various tiny mites that live in our hair follicles and all sorts of single cell organisms in our gut. If the transporter serves to mix the DNA of all living creatures which are in the transporter pod at the time Brundle would turn into a half-man, half-bacteria. Incidentally, DNA from a bacteria, an amoeba or a hair follicle mite would be just as 'compatible' with human DNA as that from an insect. It's quite a simple chemical, really.
Plot hole: How can Bumblebee and Optimus already have the car specs and colours before they leave Cybertron for the first time to come to earth? Optimus didn't have this when they came to earth in the first Transformers movie.
Plot hole: Peter goes into Carl's mind to save Catherine. When he's in there he sees the tank with the water nymph. On the tank are strange symbols which provide the FBI with the clue needed to find the latest victim. Makes sense so far. But, go back to the scene just after the FBI have captured the comatose killer and are looking in his basement. The FBI are looking at the contraption that the killer uses to suspend himself over the victim. On the contraption is the same symbol seen later on the water nymph's tank. Why didn't the FBI follow up the symbol then?
Plot hole: The facilities at Ft. Hood have working electricity to power the simulators, projectors, etc. even though it's been 1000 years, with no logical reason for the Psychlos to have kept the facility maintained, and the fact that the Psychlos should by rights have leveled the place when they invaded 1000 years before. Even automatic backup generators would have no fuel after 1000 years dormancy except for a nuclear system, which would still have required regular maintenance over a 1000 year interval to maintain automatic functionality.
Plot hole: When George stops the machine for the first time, the candle burned down to about half of its size, which took according to his observations 98 minutes. But as the trip continues it takes seven hours for it to burn down completely. (00:25:45)
Plot hole: The spinosaurus manages to smash through a metal reinforced wall designed to stop dinosaurs getting past it without too much effort, yet it can't get through a wooden gate secured by some metal bars. It makes no sense.
Plot hole: The whole premise of the movie is that due to a botched spell, people who happen to know that "Peter Parker is Spider-Man" are pulled inside this universe. It's a bit of a stretch already that amongst those people is...Peter Parker himself, twice over, but let's say it makes sense. The problem is that Jamie Foxx's Electro does not meet this condition; he never found out. You could say it's a retcon or it's a different universe from the original movie's, but even this cop-out explanation is negated by the movie itself when Max Dillon makes a joke that shows that he didn't know Spidey's identity or even race.
Plot hole: At the angle of descent and the speed it was traveling (still burning from reentry even), when the space shuttle crashed in the opening of the film, it would not have left much of anything behind. The kinetic explosion that would have resulted would have downed the forest around it for a good distance leaving a crater, and the clean up crews would have been lucky to find any piece of the ship itself still intact bigger than a football. Much less been able to find any discernible remains of the crew. Yet bodies were being taken out in still relatively good condition. And probably most unbelievable is that the glass containers holding the Symbiotes were not even broken.
Plot hole: As the gun-toting Norseman approaches the buildings, Garry smashes the single-pane window with his handgun. It is inconceivable that the glazing in a structure near the South Pole would be single-pane glass, that could be broken so easily.
Plot hole: After Superman has reversed time the Hoover Dam reverts to its previous undamaged state as it should, but Jimmy Olsen should then have been replaced back on the dam. Instead he interrupts the potential kiss between Lois and Superman and complains of being abandoned by Superman in the desert.