Deliberate mistake: When Peter and Miraz are fighting, Peter stabs Miraz and then brings the sword back up for the killing stroke. There is no blood on the sword. This is deliberate on the part of Disney, so as not to show blood, but a mistake nonetheless.
Deliberate mistake: In one of the dogfight scenes a Japanese Zero crashes into a tower. It's a quick shot, but you can still see that what crashes is an American P-40 with Japanese markings.
Deliberate mistake: Bosley is a school crossing guard trying to help the Angels. The children behind them say they are gonna be late for school. Of course they're going to be late because there is not a school within 10 miles of where they are standing. There's trees and what looks like a huge mountainside on the other side of the street. You can see this more visibly as the car that is about to run over Bosley is approaching. Done for a gag, but still ridiculous. (01:09:05)
Deliberate mistake: Twice in this film Axel is shot at by multiple gunmen using automatic weapons at close range - and they all miss. In the Earthquake theme ride the bullets ricochet of the rails at Axel's feet. Why are they all aiming low? Why don't they raise their aim? In the park outside he hides behind a perfectly ordinary park bench and the bullets hit the wooden slats. Not one goes through the open spaces between them? I know bad guys can't shoot straight in the movies, but this is ridiculous ...
Deliberate mistake: After the Tusken Raider has attacked Luke, he raises his stick over his head and shouts. The movement of his clothing is extremely unnatural. During the editing, they put the same footage forward, then backward many times, to add emphasis to his movements, but it looks decidedly odd. (00:29:02)
Deliberate mistake: Despite taking place for at least three years (prior to the arrival of Thomas) in an isolated post-apocalyptic setting, the boys in the Glade have professional looking hairstyles, not the least of which are Minho and Gally, who both have short hairstyles that look evenly cut and professionally maintained.
Deliberate mistake: When the two assassins enter Leo's bedroom and try to gun him down, the one on the right has left his tan overcoat open. He's the one that escapes from Leo initially. Shortly thereafter, Leo guns him down, firing up into a second story window. At this point we see that the assassin's coat is now buttoned up, probably to conceal the numerous squibs used in his death scene. (00:41:00)
Deliberate mistake: At the elephant graveyard, little Simba claws Shenzi in the face. When Mufasa saves Simba from the hyenas, the cuts are gone, a few seconds later. [This was done intentionally, I'm sure, for two reasons. The first being, Disney doesn't let fresh scars linger on the screen too long. Secondly, during that same scene when Mufasa rescues Simba & Nala, he claws Banzai in the rear. To stress the point later in the movie, that severe scar is shown too, but only briefly, it too disappears because of reason 1. Still a "mistake", but there's why.] (00:21:50)
Deliberate mistake: Towards the end of the movie fish are seen to swim down in order to submerge the net in which they have been caught. Although the attempt seems logical, it actually needs power against the net to push it down. None of the fish seem to touch the net at the bottom however and if it is the whole mass of fish achieving it, then the bottom fish should have been squashed against the net which (again) isn't the case. 'What brings the net down?' is the question here. (Done deliberately by Disney/Pixar to be visually aesthetically pleasing.)
Deliberate mistake: After Peter says, "We can't both have her lady," he shuts the window from the outside and the bottom pane is placed on the outside of the top stained glass pane. This is obviously done specifically for this shot so Peter would be able to shut the window and try to keep the Darlings from opening it. However, in the next shot as the Darlings succeed in opening the 'stuck' window, the bottom pane is on the inside of the top stained glass pane. (00:02:05 - 00:58:45)
Deliberate mistake: After having wrestled with Santini in his office, Col. Virgil Hedgepath tells Santini, "And no more assaulting corporals in the latrine." Marines use the naval term "head" in refering to the restroom, and would never call it "the latrine." However, since "latrine" is better known to civilians, this could be a deliberate mistake by the film makers.
Deliberate mistake: When Boo laughs repeatedly while playing hide-n-seek with Sully in the men's room, nothing happens to the electricity - no surges as with all other times she laughs. [In the audio commentary by the directors, they explained that it would've been distracting if an energy surge occurred every time Boo laughed, so they simply didn't address the issue. A reasonable course of action, but still a mistake.] (00:37:30)
Deliberate mistake: When Austin and Felicity cross the street when they are shopping, you can see green hills behind them, very much like Hollywood and not 1969 London. (Deliberate reference to an earlier joke)
Deliberate mistake: When the Trunchbull is drinking from the glass with the newt in it, you can easily see that she doesn't actually drink anything, as the water level stays exactly the same. Logical, as the newt is real, but it's still very obvious because she drinks for about 15 seconds. (00:46:55)
Deliberate mistake: When the Creeper gets stabbed through the eye with the javelin, it goes through the front of his eye, but when it comes out the other end the eye is facing backward. (00:50:00)