Continuity mistake: When Sophia walks out of the hospital with Lincoln she has blood drips down her right side of her shirt. After Susan tells her to go home the blood is down the left side of her shirt. (00:04:00 - 00:05:00)
Continuity mistake: The shadows and lighting change throughout the scene with T-bag giving the money to the prisoners. At one point he is in shadow, the next full sun.
Visible crew/equipment: Gretchen arrives at the pickup spot with the van with LJ inside of it. As she opens the back door the camera moves closer and the reflection of the crew in the glass is obvious. (00:08:30)
Good Fences - S3-E4
Visible crew/equipment: When Whistler talks to Sophia about Lincoln, the camera starts from a high angle. It moves down and to the right. During this time it casts a very obvious shadow on the fence.
Good Fences - S3-E4
Continuity mistake: The same aerial shot of the prison tower from the previous episode is shown again near the beginning of this episode. Take note of the vehicle driving to the right. Some time has passed between the previous episode and this one.
Call Waiting - S3-E3
Other mistake: Sucre is supposedly passed out, however when Lincoln puts him on the couch his arm moves upward.
OrientaciĆ³n - S3-E1
Continuity mistake: The way Gretchen holds her martini glass when first talking to Lincoln shifts during camera angle changes. (00:36:45)
Good Fences - S3-E4
Revealing mistake: After T-Bag has been confronted with the death of Nieves and Nieves' body is shown on the floor, his stomach moves as if he is breathing. (00:32:30)
Good Fences - S3-E4
Continuity mistake: When Alex snaps at Bellick while looking for a felt tip pen, they move apart between instant shots. (00:10:40)
Continuity mistake: They are hanging on the helicopter's rope, then they're still fighting on the roof and the helicopter's rope is being lowered. (00:37:50)
Other mistake: When the driver hits Sucre's car you can see a doll in the driver seat. And after the fight Gretchen gets in the car by herself and starts the car on the wrong side (the passenger seat), plus when she leaves the dead body disappears. (00:34:22)
Continuity mistake: We see Link driving with a blue short sleeved shirt on. When he arrives at his destination he's wearing a long sleeved grey undershirt. (00:14:20)