Continuity mistake: When Sam is in his bedroom, after he finds the Cube sliver it falls and dramatically burns a hole through the floor into the kitchen. But Sam's bedroom is over the living room (there is nothing on the ground floor below Sam's elevated bathroom, and in the first movie Jazz hides in this open space), and the kitchen is actually located between the den and dining room, at the other end of the house. If they were to follow the actual floor plan of the house, the Cube sliver would have landed in the area of the piano in the living room, but where would the fun have been in that? (00:12:30)
Plot hole: Inmediately after Jamie Foxx finds the bomb in the city hall, and he says, "We don't tell the mayor anything", we see Gerard Butler arriving to his property next to the prison, and finally he enters his jail cell. So, in the time between Gerard Butler's arrival to the property and his entrance to the jail cell, Jamie Foxx thought about a plan, picked up the bomb, passed through the traffic and security checkpoints, talked to the warden to get access to the prison, entered solitary, handcuffed the bomb, and still had time to wait for Gerard Butler's arrival.
Plot hole: During the later parts of this movie there is much talk about 'continental displacement' and this appears to be happening in the film. The Earth's crust is falling apart because of the heating of the inner core, and all the cities seems to be falling apart since the ground can no longer hold them. When our cast finds themselves surprised to be already over China when they figured to be over the ocean, it is explained that Asia has actually moved from where it was. If this phenomenon is taking place globally, how come the monks in China don't seem to have been disturbed at all? In fact the bell the monk rings as the ocean approaches hasn't even been shaken. The arks are built in between the mountains, but the mountains are apparently fine. Shouldn't they be falling like the rest of the crust?
Continuity mistake: During the paper cut scene, when Bella is thrown against the table, there are 5 vases of flowers and 3 sets of candles. After she hits the table she lands against one of the vases and knocks the 2nd one to the floor, but the next shot shows only one vase left upright. (00:14:50)
Continuity mistake: In the scene where Parker is shown playing golf on the indoor golf course in RDA, the first time he hits the ball, there are two other balls lying on the course side by side. In the next shot, two are distant apart and in the shot after that, they are in their original position. (00:12:15)
Other mistake: When Marcus, Kyle and Star are at the petrol station, a flying HK and the giant Harvester robot are able to appear just outside without making any kind of sound. In every other scene of the Harvester and the HKs however, they both make an incredible amount of noise. (00:37:40)
Other mistake: At 1:39:14 the bomb arms, 32 seconds later at 1:39:46 (two seconds after it should have blown up) Dan and Molly jump from the helicopter. Then 10 secs later at 1:39:56, the plane FINALLY blows up after giving them those extra 12 secs to jump and conveniently make it to the pool below.
Factual error: During the first tunnel sequence, all the cars travel very far into the mountains, turn lots of corners, yet not only is Gisele still able to speak to them over the radios, their GPS still works. GPS signals invariably need a clear 'sight' of the sky and can penetrate light cover, but most certainly not that depth and cover. (00:58:05)
Continuity mistake: In the scene where Watson and Adler are laying out the map, they place two objects on the map to hold it down. In the very next clip where it shows Holmes talking, you see Watson and Adler placing those same objects on the map.
Other mistake: When Laurie has her episode in the bathroom about killing Annie, the clock stays at 7:03 the whole time.
Continuity mistake: When they give Garber the pistol to take, it has actually changed when he pulls it out of the bag, it's an entirely different pistol.
Continuity mistake: After the car chase, the front plate of the taxi is hanging on one side. Moments later, while driving the cab and fighting the other "alien," the plate on the taxi is in a different position (semi-fixed). (00:46:00)
Factual error: In the underwater scene when Rex blows up the ice pack, ice appears to be denser than water in this situation. The ice sinks when it's blown up, and even if there were pieces of metal on top of the ice, it shouldn't. Some pieces the size of a five-story building have no metal and still sink. (01:43:00)
Factual error: In the beginning a calendar says 2019 April, you can see April 1 being Tuesday when actually April 1 2019 was a Monday. (00:01:10)
Continuity mistake: When Romey hits the little boy, she immediately parks her car and gets out. She closes the door behind her and runs to the little boy. After making sure he is ok, she goes back to her car and the door is open.