Plot hole: Kate in the Batcave says with absolute certainty "Alice doesn't know that Bruce Wayne is Batman. Whoever stole the gun, knew that Bruce had to have the suit to test it on." Both statements are leaps in logic with no foundation. Alice knows that Kate is Batwoman, and that Bruce's office is her center of operation (she even shines a bat-signal there!). It would be perfectly logical to assume that she made the connection. The testing bit is simply a non-sequitur; plenty of weapons can be made and tested on armor which fits the specifications, real or inferred, of a particular target, without being in possession of the item as a whole. (00:16:00)
Plot hole: White Base and the interior of Luna II withstand without a scratch the explosion of the thermonuclear reactor from the Magellan from just a few meters, while the blast literally vaporizes the Zaku far away from the entrance and threatens to damage the Musai, hundreds of meters away.
Plot hole: It is revealed that Malia has been living as a coyote for eight years but earlier in the season it's shown that all shape shifters lose their powers and becomes human during a lunar eclipse, which happened in the midseason finale. So why didn't Malia turn back?
Plot hole: Lucien, Trustan and Aurora are somehow compelled to believe they are Mikaelsons, when no-one knew how to compel until Elijah compelled Aurora by mistake when they fled. So when did this supposed compelling happen? Did Elijah go back and do it later on? The siblings all had knowledge of him compelling them, so I'm confused exactly when they all learned of their ability.
The Daughters of Jerusalem - S2-E6
Plot hole: Dinah Fortescue's fingerprints are supposed to be on a teacup but she's wearing gloves in the flashback. So how did they get there? (00:24:35 - 00:33:34)
Cygnus! Hyogen no senshi - S1-E3
Plot hole: Saori Kido's presentation does not make a lick of sense. Assuming it happens through some odd holographic mechanism never seen before or after, it's day 3 of the tournament, so it appears extravagant that only then she'd start telling the audience what the Galaxian Wars are. Second.it's day 3 of the tournament.and the third match. That means that they have been packing a stadium with dozens of thousands of people, who come over for ONE match that lasts a few minutes. That's a real stretch, to say the least. There's also a minor but kinda funny matter; the way the cameras are shown pointing, the whole world is tuned into an uninterrupted upskirt shot of Saori Kido delivering her solemn speech.
Plot hole: Matlock figures out that The Professor wouldn't have been able to see the security guard from 50 yards without glasses, and that's what tips him off about The Conspiracy: the guard testifying that the man wasn't wearing any. However, when we see the scene happen at the beginning of the episode, the person posing as Prof. Erskine Tate is, in fact, wearing glasses. (00:04:15 - 00:22:15)
Plot hole: In the pilot episode Chuck mentions his mother speaking as though she is still alive and he knew her but in later seasons it is reveled that she supposedly died while giving birth to Chuck and he never knew her.
Plot hole: In the lab when Liz makes the slides of her cheek cells and the cells from Max's pencil, the first time she doesn't add stain and the second time she does. If she's going to be a molecular biologist she really ought to learn to apply techniques consistently. (00:07:30)
Plot hole: It's been established that if you die on the property, you remain as a ghost for all of eternity. However, in Season 8, Moira's bones are retrieved and buried in a cemetery so that her ghost can escape and join her mother. However not all the ghost's bones are buried on the property, we know for sure that the Black Dahlia was not buried on the property and it's not likely Tate, Vivian, Ben or some of the others are buried on the property as well so they should not be tied to the house.
Suggested correction: Tate's victims from the school shooting are ghosts who can move between different locations. There's nothing to suggest that the ghost of the Black Dahlia isn't merely choosing to be in the Murder House rather than being tied to it. The same goes for Vivien and Ben, since Violet is going to stay in the house, so might they.
Plot hole: The grounder's leader Anya states that the missiles (flares) burned a village to the ground. If this were true, the flares couldn't have flown very far, otherwise that village would have been too far away for the grounders to know about. In a previous episode, when you saw the flares from space, it was obvious the flares traveled hundreds if not thousands of miles away. (00:31:30)
Plot hole: In the end of the episode, Wolverine is seen recuperating after surgery removes the microchip in his brain, and his head is bandaged. Performing invasive surgery on Wolverine's brain isn't possible, since that would require going through his adamantium-infused skull and no conventional material is capable of that. Only a less invasive technique (such as going through the cranial sutres or cranial foramen) would have been effective and that most likely would not have required Wolverine's head to be bandaged (especially with his rapid healing mutant ability).
Plot hole: While Mundy is trying to disarm the briefcase bomb in the study, his time-sensitive work is interrupted no less than 6 times by people barging in from the party out front. The plot device adds comic relief, but there's no earthly reason why he couldn't have locked or barricaded the door in the first place. (00:36:00)
Plot hole: There is no way that Zoey could've seen those boys hanging Chase's bike from a tree. She was way far from the window to even recognize his bike, and when Chase looks through the window, the bike was just now being lifted from the ground.
Plot hole: In Pemberley, Caroline Bingley refers to an utterance of Darcy ("I should as soon call her mother a wit") that he made after coming home to Netherfield after their first ball in Meryton. Falsely she says he made this expression "after they had been dining at Netherfield". This is a direct quotation from the novel and is not coherent with the film plot in which this utterance is made after the first ball.
The Monsters are Due on Maple Street - S1-E22
Plot hole: The street sign in the beginning is all wrong: it faces the camera rather than the street where the story takes place. In a typical American city, street signs are almost always placed in the direction of the street they are indicating, so drivers on the other street in the intersection know what they are turning onto or passing. In other words, the story is not set on Maple Street! Maple Street is the intersecting street at the end of the road the story is set on.
New York City Serenade - S3-E12
Plot hole: When talking to Hook about the photos, Emma states he could have photoshopped them to make it look like she and Henry were in Storybrooke, however she had taken them directly from Henry's camera and had them developed. So Hook had no way to photoshop the pictures from inside the camera. (00:27:00)
Over My Head - S3-E4
Plot hole: Daphne was able to hurt Duke because his name appears on her cell when he called, but names only show up on a cell phone if the person's number and name are programed into the phone, and Duke has already said he doesn't know her.
Plot hole: Guards at a security checkpoint attack Varrick and Bolin, because a wanted poster identifies them as fugitive traitors. The problem is that poster cannot have been there. Varrick and Bolin escape in the previous episode (Battle of Zaofu) but are captured minutes afterwards. (So, no posters needed.) The next day, they escape again by blowing up their imprisoning train car. Their captor, Bataar, thinks they are dead. Indeed, Varrick intended to die. Later, Bataar is actually shown reporting them dead. One might argue that the poster wasn't a wanted poster, but one that warned people about the empire making an example of the traitors.This argument is too flawed: The empire had many examples already, some very high-profile. And a propaganda poster must be placed in plain sight, not in a security booth corner especially designated to let security guards compare the passing individuals. (00:14:00)