Continuity mistake: When Booth is interviewing The Man in the Wall, he is stood to the side of the door. Camera changes and now he is in the middle of the door. (00:33:50)
Continuity mistake: At the start Bones starts to put the roof down on her car. Camera cuts and the roof is instantly down. Not possible in an instant cut. (00:01:40)
Continuity mistake: When Zac is signing for his package, the courier has her hands on the top of the box. Camera cuts and they are no longer on the box. (00:18:05)
Continuity mistake: At the end after shooting Farheed, we see Booth with both hands on the railing. Camera shows a secret service operative opening the camera bag containing the bomb then cuts back to Booth who suddenly has his gun back in his hands and raised as if he had just fired. (00:38:50)
Continuity mistake: When Bones and Booth are arguing in the bar about the wife having an affair, Bones has chopsticks in her hand that disappears. (00:18:00)
Continuity mistake: Bones holds a red bag that is scrunched up for Angela at the start. Camera cuts and the bag is unfolded and being held open by Bones. (00:03:00)
High Treason in the Holiday Season - S11-E8
Visible crew/equipment: While they're doing a full workup of the room at the Riverbanks Inn, just as Hodgins mentions that Ryan Gill has been in the room like an elephant in a china shop, when Agent Aubrey walks in the T-mark can be seen on the carpet. (In the Netflix version the T-mark has been edited out).
A Night at the Bones Museum - S5-E5
Continuity mistake: The mummy is in direct sunlight with no shadows on him when Cam first walks up to examine him. When Bones and Booth walk up to him, a few seconds later, the right side of his face is in the shadows. (00:04:00)
The Woman in the Garden - S1-E13
Continuity mistake: Booth and Brennan arrive at the crime scene in the beginning of the show. After she has confirmed that the bones in the trunk belonged to a woman, a black car drives by and shots are fired. At first, the trunk of the car is less than halfway opened. Cut to the next shot and the trunk is fully opened. (00:02:10)
The Knight on the Grid - S3-E8
Continuity mistake: Amy comes to see Brennan at night to tell her about her daughter's sickness. There are a bunch of letters on the kitchen counter. The envelopes move around in between shots, most noticeably the brown one. (00:03:20)
The Priest in the Churchyard - S2-E17
Continuity mistake: At the diner, after Dr. Gordon has told Bones and Booth the problem with their relationship, the two shares a triumphant hand slap. Bones' glass refills itself between shots.
Continuity mistake: At the diner, before Mrs. Duncan comes to confess about murdering her husband, Brennan takes a sip of tea. Her glass at this point is less than half full. When Mrs. Duncan walks in, the same glass is now almost full.
Stargazer in a Puddle - S2-E21
Continuity mistake: In the establishing shot of the church where Angela and Hodgins are having their wedding, the walls are all white. When they flee the wedding, the exteriors are red brick. (00:36:00)
The Girl in Suite 2103 - S2-E6
Continuity mistake: When Booth and Brennen are questioning the Senator's son, the cap on the bottle of water keeps switching from being on and being off between shots. (00:16:20)
Answer: Answering my own question here but, having contacted various people involved in the production of Bones including Kathy Reichs, Hart Hanson, Eric Milligan, and Deirdre Lovegood who portrayed Taffet onscreen I finally have the answer. No-one know how she did it due to her constantly working alone. And she never revealed this information before her death.
Ssiscool ★