Flux: Chapter Three - Once, Upon Time - S13-E3
Continuity mistake: In the previous episode Swarm put markings on Yaz and Vinder to mark them as replacement Mouri but in this episode, which takes place right after, they no longer have any markings.
Flux: Chapter One - The Halloween Apocalypse - S13-E1
Continuity mistake: Karvanista smashes his way into Dan's house by breaking down his door with an axe. When the Doctor and Yaz arrive after Dan's abduction, the hole in the damaged door is smaller than it was originally. (00:17:30)
Flux: Chapter One - The Halloween Apocalypse - S13-E1
Continuity mistake: At the very start, when Yaz says, "Oh yeah, we are totally in command," just as it begins to zoom out, the handcuff around Yaz's right wrist has the double bar facing out and her left wrist has the single bar facing out, but in following shots both handcuffs are facing the same way. Similarly, this occurs with the Doctor's handcuffs around both wrists, when the Doctor keeps trying the voice recognition. (00:00:10)
Chosen answer: 1) When Stephen Moffat took over he ignored a lot of what had been developed before (there is not in-universe answer). 2) It would have killed Rose, so the Doctor absorbed the energy. His body regenerated before the energy could do a significant amount of damage that would prevent regeneration.