Continuity mistake: When the lawyer at KBC Systems slides the file to Booth we see the file reach Booth. Camera changes and it reaches Booth again. (00:17:10)
Continuity mistake: The position of Carl Decker's gun in relation to the head of the head of KBC systems is constantly changing between shots. (00:29:00)
Visible crew/equipment: Just after Booth gets the codeword from Decker, we see a shot of him and a boom arm can be seen moving in the door's reflection behind Booth. (00:32:30)
The Superhero in the Alley - S1-E12
Visible crew/equipment: At the very start the landing skid of the filming helicopter is in shot for several seconds. (00:00:10)
The Superhero in the Alley - S1-E12
Continuity mistake: When Bones is shading on the piece of paper at the start, it goes from wide light shading to narrow and dark. (00:06:30)
The Superhero in the Alley - S1-E12
Factual error: Booth is supposed to be a (former) Army sniper. Military personnel chosen to be snipers are expert shooters. At the young mans grave, Booth places a sharpshooter badge on the boys casket. Being a sniper, Booth should be an expert and, as such, should have placed an expert badge instead of a sharpshooter. (Rifle and Pistol sharpshooter badges in rank lowest to highest: marksman, sharpshooter, then expert.)
The Superhero in the Alley - S1-E12
Continuity mistake: Near the end, when Lucy first looks at the comic book, the page across from the "thank you" page is different than when it is shown a few shots later.
The Woman in the Garden - S1-E13
Continuity mistake: At the very start Booth has his hands by his side then on his hips instantly. (00:00:05)
The Woman in the Garden - S1-E13
Continuity mistake: When Booth checks out the gang tattoo his grip on the suspect's shoulders changes instantly. (00:01:00)
The Woman in the Garden - S1-E13
Continuity mistake: Booth and Brennan arrive at the crime scene in the beginning of the show. After she has confirmed that the bones in the trunk belonged to a woman, a black car drives by and shots are fired. At first, the trunk of the car is less than halfway opened. Cut to the next shot and the trunk is fully opened. (00:02:10)
The Woman in the Garden - S1-E13
Other mistake: Just after Booth realises the drive by was done to help the gang member escape, we see him run up to Bones who's on the forensic platform. However Booth doesn't swipe his pass to allow him entry. Whenever anyone walks up without swiping the card, a siren goes off and the security guard stops them. Regardless of who they are, as demonstrated in several episodes. (00:06:00)
The Woman in the Garden - S1-E13
Continuity mistake: When looking for the plant Hodgins, Bones and Booth are in the 4x4 driving down the road. However in the shot of the car approaching the camera it is not Booth driving. (00:07:40)
The Woman in the Garden - S1-E13
Continuity mistake: The sketch that is shown to the senator goes from creased and folded to perfectly flat and smooth. Her grip on the paper also changes instantly. (00:12:30)
The Woman in the Garden - S1-E13
Visible crew/equipment: At the end when the cameras zoom in on the coffins, the crew are reflected in the brown one. (00:38:20)
The Woman in the Garden - S1-E13
Continuity mistake: When the man who put a hit out on Bones is ambushed by Booth, Booth's grip on his face changes instantly. Note the fingers in front/behind his ear. (00:39:30)
The Man on the Fairway - S1-E14
Continuity mistake: At the start Bones asks Zac what he thinks of the bone fragment she is holding up. Camera shows Zac walking over the Bones who is now pointing at the ground. Camera shows them close up and Bones is now holding the fragment again. (00:02:15)
The Man on the Fairway - S1-E14
Continuity mistake: In the restaurant near the start Booth's napkin disappears instantly. (00:09:00)
The Man on the Fairway - S1-E14
Continuity mistake: When Angela walks over to the wood chipper she is drinking from her drink. Camera cuts and she has her arm with her drink in out to the side. (00:25:40)
The Man on the Fairway - S1-E14
Continuity mistake: When Booth is talking to Max's son about how the simplest explanation is usually right, he is pointing with his finger, camera cuts and he is no longer pointing. (00:29:25)
Two Bodies in the Lab - S1-E15
Continuity mistake: At the start when Dr. Goodman interrupts Bones, her hands go from the keyboard to on the arm of her chair instantly. (00:00:45)
Answer: Answering my own question here but, having contacted various people involved in the production of Bones including Kathy Reichs, Hart Hanson, Eric Milligan, and Deirdre Lovegood who portrayed Taffet onscreen I finally have the answer. No-one know how she did it due to her constantly working alone. And she never revealed this information before her death.
Ssiscool ★