Halloween Approximately - S2-E2
Continuity mistake: When Francis walks into the boy's room the calendar says September 2000. In the next shot it changes to October 2000. After that Reece says "No, it really is the 31st" he flips up the September page of the calendar to October. (00:06:15 - 00:07:15)
Dinner Out - S2-E4
Continuity mistake: When Lois and Kitty Kenarban (Stevie's mom) are at the table in the restaurant, while Hal and Abe sit at the bar, things on the table change position or disappear and reappear between shots. Same thing happens at Malcolm's table with Reese and Stevie.
Reese Cooks - S2-E18
Continuity mistake: During one of Reese's cooking classes, Hal puts some bread into a toaster. It then cuts to a shot of Reese. When it cuts back to Hal, the toast that pops out of the toaster isn't the same shape as the bread he put in.
Continuity mistake: In the bowling alley, the design above the pins is blue and pink pins. While in the back of the bowling alley, above the pins is a different design.
Continuity mistake: In the side of the story when Lois takes the boys, Malcolm has some kiddy bumpers put in to help him bowl. In the next scene when Reese is about to tell Beth the joke, you can see the lane which Malcolm was just at but there are no bumpers in the gutters. Then later when Malcolm stands up to Lois they are back in the gutters.
Continuity mistake: When Francis gets pulled over, his window is open and closed between shots.
Answer: Francis is only allowed to talk on the phone at school for three minutes a day. I think the code gives him free access to talk to his girlfriend.