Continuity mistake: In the freeway scene, Morpheus fights an agent. Right before Morpheus gets knock off onto Niobe's car, you see Morpheus land and lose his balance on the left side of the back of the truck, but when there is a shot of Morpheus falling off the truck, he is falling off the centre. (01:34:55)
Continuity mistake: In the scene where Trinity is typing the 'disable grid nodes 21 - 48' command, she is pressing random keys rather than the correct sequence. The text already on the screen in the beginning of the next shot is 'disable grid,' but the 'G' key is one of those that have not been pressed, whereas 'H', for obscure reasons, has been. (01:43:35)
Continuity mistake: Near the end of the film when we see the Keymaker open the door and Neo kicks Smith to make a gap, if you look where Neo is, there are two Agent Smith's behind him, they are looking towards Neo's direction and pulling there guns out, yet when the shot changes to a close up, the two Agents are facing one another and then pull there guns again. (01:44:10)
Continuity mistake: During the freeway scenes, the katana Morpheus used as a foot hold to grab the keymaker keeps moving. It was at arm's length from the top when he inserted it; when Morpheus was standing on it, the sword was a whole body length below the top; when Morpheus took the sword out in his fight against the agent, it was back in its original position.
Continuity mistake: In the car chase scene, when Trinity is driving the cadillac, the Agent in the cop car slams into the driver's side of Trinity's car and the driver's side mirror is bent inwards. When Trinity drives the cadillac onto the exit ramp, the driver's side mirror is back in its normal position.
Continuity mistake: During the car chase, the twins shoot out most of the windows in the car that Trinity and Morpheus are driving in. But every time they cut to a shot of them inside of the car, the windows are intact and there is no shattered glass to be seen.
Continuity mistake: Trinity's cut on her right arm disappears and reappears throughout the freeway scene.
Continuity mistake: In the highway chase scene there is a shot of the police cars before they get onto the highway and the cars are Chevrolet Caprices. When they are on the highway chasing Trinity's car, the police cars become brand new Chevrolet Impalas. But when the police cars start to ram her, they become Caprices again.
Suggested correction: There were 3 police cars; two Impalas and a Caprice. The police car possessed by the agents was always a Caprice from the beginning. One of the Impalas rammed into the black Oldsmobile Intrigue which was shot and flipped by the twins and the other Impala disappears after the massive crash scene (probably crashed within the mayhem).
The Impalas were ahead and the Caprice was behind in the tunnel before the highway. Right after the highway scene (when the CTS Swerves between two trucks) however, you can see 5 cars (one Caprice and three Impalas, and one unknown car ) but after that it's back to 2 Impalas and Caprice. So the mistake is three cars turning into five, not the switch between Caprice and Impala.
Continuity mistake: When Neo and the keeper are fighting on the middle bench, one by one the bowls get knocked off - the two on the far corners (left and right) reappear and disappear at least once. Likewise the pot on the right hand table with stick-like things in - that table's completely cleared at one point, but that pot reappears.
Continuity mistake: Further to the comment about some of the Smith clones not having Hugo Weaving's face pasted onto them, just after Neo does his back flip into two agents whilst kicking the two either side of him, just after he turns back around towards the camera, there is a very obvious stuntman standing just behind him who looks absolutely nothing like Agent Smith.
Continuity mistake: When the twin leaves the car that Trinity is driving, he is standing on the freeway by himself. You see a flat-bed truck, then a police car, then a red van pass him by. But when they show the shot ahead of him, the truck is still there, but the cop car and the red van are nowhere to be seen.
Continuity mistake: In the car chase scene when the Twin enters the car with Morpheus, Trinity and the keymaker the camera view changes between aerial shots and shots from in the car. In the aerial shots the road behind them is completely empty. From the shots in the car you can see several cars behind them through the windows.
Continuity mistake: In the scene of the freeway chase, where Trinity, Morpheus and the Keymaker are in one car on the right side of the freeway, there's a shot from the car of the Twins (two or three lanes to the left), Trinity's car passes a truck, when the car appears again ahead of the truck there is only the driver inside the car, no passengers.
Continuity mistake: In the scene when Neo and the counsellor Hamann are holding a conversation at night before entering the engineering level, you can see Hamman's robe's neck changing from wrinkled to unwrinkled mainly on the back side between shots.
Continuity mistake: In the fight scene between Seraph and Neo, items on the tables are constantly being knocked off and reappearing. In the first long shot, where Seraph and Neo jump from the rightmost table to the one adjacent, a bottle is knocked off, and then reappears. Almost immediately after, during an overhead shot, Seraph knocks one of the flat ashtray-like containers off the table. He moves back, obscuring the place where it was. When he moves forward again, it's back on the table.
Continuity mistake: DVD: In the 100 Smiths brawl, Neo dives backwards about four feet from the ground and a Smith dives at him from the ground to Neo's left. The following shot shows both of them at about twenty feet in the air and it looks like they are descending from the fourth floor of the building in the background.
Continuity mistake: After one of the agents rips the roof off the car on the expressway, there are some shots that show the interior of the vehicle still dark as if the roof were still intact.
Continuity mistake: In the scene where Link unplugs Morpheus from the Matrix there is a close-up of Link with Morpheus opening his eyes at the bottom of the screen. In the following two shot, Morpheus still has his eyes closed and opens them up moments after he had already has awakened.
Continuity mistake: During the freeway scene, the Twin shoots a black car directly in front of Trinity's car. He shoots on the hood and then a trail of holes are seen going up the windshield. The next shot is one from inside Trinity's car between Trinity and Morpheus, but no bullet holes are in the car ahead.
Continuity mistake: During the freeway chase, when the car is crushed by the agent, look closely and you'll see a white Monte Carlo land on top of a mini-van. About 30 seconds later you see the same thing, but up close.
