Plot hole: At the end of this episode Red takes off his shirt revealing his burned back, which leaves us to think that he might be Elizabeth's dad. However, this particular mark should have been noticed and written down in Red's prisoner file when he was taken into custody the first time (Episode 1). In that case Elizabeth would already know that Red is burned and could have asked some questions about it.
The Daughters of Jerusalem - S2-E6
Plot hole: Dinah Fortescue's fingerprints are supposed to be on a teacup but she's wearing gloves in the flashback. So how did they get there? (00:24:35 - 00:33:34)