Revealing mistake: When Qui-Gon, Jar-Jar, and Padme are eating at Anakin's house, Anakin's mum pours water for Qui-Gon. But when she gets to Jar-Jar, she tips the pitcher but no water comes out. (00:39:10)
Continuity mistake: Obi-Wan's braided hair keeps changing sides, and getting longer and shorter, most noticeably in the scenes around the underwater city. (00:13:40)
Continuity mistake: When Anakin attaches 3PO's right eye, one shot has the eye in his left hand, then the angle changes and the eye is being applied with the right hand. (00:37:20)
Continuity mistake: When Palpatine and Queen Amidala are conversing in his office (when Palpatine refers to Valorum having 'very little real power') his outfit switches from a green breasted cloak with a blue collar area to a green breasted cloak and dark green collar. It switches back after one shot. (01:23:10)
Revealing mistake: Qui-Gon's "comlink" is actually a Gillette Sensor Excel woman's razor. Borderline trivia, but it's such a recognisable shape with minimal effort to hide it. (00:50:45)
Trivia: During the scene in the senate, after the shot of a Senator calling for order, we see pods with aliens in them. Towards the lower left you can see a pod full of E.T's. There's also a pod full of Wookies making their traditional noises, played for the first time in 20 years by someone other than Peter Mayhew. (01:25:30)
Deliberate mistake: When Jar Jar gets arrested in the Gungan city, in the second shot of Jar Jar and Obi-Wan, Obi-Wan and a part of the floor behind him are reversed. This can be seen, for example, because two of the red areas on the floor have switched positions, and Obi-Wan's braid and lightsaber are on the wrong side. (00:14:00)
Deliberate mistake: When Obi-Wan is fighting Darth Maul alone, after Obi-Wan cuts Maul's lightsaber in half, they start fighting on a different side of the pit. But after Maul kicks him, a close-up of Obi-Wan shows the wall and smoke of the area that they left. The shot has been reversed as well. The easiest way to see this is to watch his braid, which is on the wrong side. (01:56:55)
Other mistake: In the ending credits, Keira Knightley's first name is misspelled "Kiera."
Continuity mistake: When the queen is being escorted by some droids after she has been captured, the shadows change completely. When we first see everyone walking past, their shadows stretch ahead of them, but when we see them walking towards Obi-Wan and Qui-Gon, the shadows are really elongated and at an angle. (00:21:30)
Continuity mistake: Sebulba snaps a bit off Anakin's pod and it is left dangling, however in the following scene where Sebulba is talking to Anakin, the part is back in its original position. (00:54:45)
Answer: The entire time Palpatine is bitching to Viceroy Gunray that he needs the Queen to sign the treaty to make the blockade and invasion legal. He didn't send Darth Maul to kill Amidala, he sent him to capture her and to deal with her Jedi escort.
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