Audio problem: There are several times throughout the film when Miss Minchin is playing her harp and her finger movements does not match with what we hear.
Audio problem: When Josh is telling Ben Stiller that the candy belongs to Seymour Butts, his lips don't match the words he's saying. In the next shot, Ben Stiller responds, and his lips don't match the words he's saying either.
Audio problem: On the way back to the house, in the back of the horse cart, Babe and Fly are talking to each other. They never open their mouths while they're talking.
Audio problem: When the Bat Exterminator is pointing at the book in the attic, he says "Some kid said she saw a bunch of those back in the 60's." His mouth is visible in the screen, however it doesn't move at all. (00:18:50)
Audio problem: When Drosselmeier and his fellow adviser, the astrology scholar, run into Drosselmeier's cousin and are presented with the Crackatook nut, the scholar snatches it and then exclaims, "it is a Crackatook nut!" After he finishes saying that, his mouth continues to move for an extra syllable that looks like he says nut twice.
Audio problem: Billy swings across the construction site to help Aiesha, he then stamps on some ooze men's heads. He counts each stomp up to 6 and we hear 6 stomps. However there are only 3 ooze men, and we can plainly see Billy doesn't stomp any more than once. (00:25:25)
Audio problem: When Max tells Fishman to get the hell out of here, his lips don't move.
Audio problem: When Andy is in his cardboard Buzz costume, and says "Buzz Lightyear to the rescue, " his mouth doesn't move.