Visible crew/equipment: At the very start the girl bends over to put her stuff down on the floor. Her top rides up a bit and exposes a black microphone wire. (00:00:30)
The Santa in the Slush - S3-E9
Continuity mistake: Booth says that Parker is going to Vermont with Rebecca and Captain Fantastic. When he does he has his hands down and is driving. When the shot changes he's rubbing his head with one hand. (00:03:10)
The Knight on the Grid - S3-E8
Audio problem: As Booth works out Gormogon was trying to kill them he says "because we know the next target" the line is an overdub of the audio. (00:26:30)
Soccer Mom in the Mini-Van - S3-E2
Continuity mistake: When we see Booth and Caroline in the interrogation room for the first time the gentleman has his legs crossed right over left. When the camera changes he is sat left over right. (00:16:50)
The Knight on the Grid - S3-E8
Continuity mistake: When the taxi gets blown up we see the bag explode twice. Once which lifts the taxi slightly then a second time to help throw it over. (00:24:50)
The Priest in the Churchyard - S2-E17
Continuity mistake: In the diner, Booth states that Father Donlan keeps getting sent troublesome priests. When he does he has one hand in the air. Camera cuts and now he has both hands up in the air. (00:31:00)
The Knight on the Grid - S3-E8
Continuity mistake: When Booth drags Bones out the car, he places her on the sidewalk. While putting her down her position changes drastically between shots. (00:25:40)
Boy in the Time Capsule - S3-E7
Continuity mistake: In the car, Bones tells Booth about the one boy from High School she had a thing for. When she does her hand appears by her neck instantly between camera cuts. (00:09:20)
Intern in the Incinerator - S3-E6
Continuity mistake: After the autopsy we see Booth hanging around Hodgins' desk playing with two glass tubes. These tubes are horizontal and the ends of both tubes in Booth's hands. When the camera cuts, one tube is now angled upright and the end is no longer in Booth's hand and completely visible to the camera. (00:26:00)
Boy in the Time Capsule - S3-E7
Continuity mistake: When the tank is drained, the Rubik's cube changes position. It goes from green face up to red face up. (00:02:30)
Intern in the Incinerator - S3-E6
Continuity mistake: Cam tells everyone to forget Gormagon and look at the evidence. When she does this, Angela has her hand in her pocket. When shot changes she has both hands out of her pocket and holding a folder. (00:15:50)
Intern in the Incinerator - S3-E6
Continuity mistake: After discovering the kill site, Angela is talking to Zack. When she does, so she has her hands lowered by her waist. When the camera changes her hand is now by her chest playing with her pen. (00:15:00)
Continuity mistake: While in the car, after speaking to the victim's groom for the first time, Bones is looking straight at Booth in one shot then down in her lap in the next. (00:14:15)
Soccer Mom in the Mini-Van - S3-E2
Continuity mistake: When Bones first opens the locket at the crime scene the way it's held changes between shots. (00:02:50)
Stargazer in a Puddle - S2-E21
Continuity mistake: Near the end we see Bones show Max that she is wearing her grandmother's ring. In the closeup her fingers are all together but in the long shot her fingers are splayed apart. (00:29:30)
The Priest in the Churchyard - S2-E17
Continuity mistake: When Bones and Dr Gordon are in the interrogation room, Dr Gordon has his hands up in front of him when Bones gets a phone call. As the shot changes, his hands are lowered and on the table. (00:26:40)
The Priest in the Churchyard - S2-E17
Continuity mistake: When the priest is naming the plants, Bones' arms go from by her side to crossed in front of her instantly. (00:05:50)
The Priest in the Churchyard - S2-E17
Continuity mistake: When the priest names all the plants he points with his right hand which between camera cuts becomes his left arm. (00:05:50)
The Boneless Bride in the River - S2-E16
Visible crew/equipment: Bones asks Sully if he can afford the boat, and he turns to look around the boat. When he does a mic pack is visible attached to his belt. (00:05:10)
The Man in the Mansion - S2-E14
Continuity mistake: When Booth takes Hodgins to the mansion to collect samples he has a chat with Clarissa. When he does so, note his grip on the top of his coffee mug. (00:19:20)
Answer: Answering my own question here but, having contacted various people involved in the production of Bones including Kathy Reichs, Hart Hanson, Eric Milligan, and Deirdre Lovegood who portrayed Taffet onscreen I finally have the answer. No-one know how she did it due to her constantly working alone. And she never revealed this information before her death.
Ssiscool ★