Audio problem: When Mario and Luigi are in the cave, walking along the cliff, Mario shouts "Watch out" but his mouth never moves. (00:21:25)
Audio problem: When Leonardo stops Daimyo, the words "Hold it, Bucko" are heard, but Leonardo is not seen to be speaking at all. (01:15:30)
Audio problem: When Phil is playing the piano with the jazz group, we hear three glissandos (dragging of the fingers over the keys starting from high to low), yet we see his hands only do one. We hear the first two happen while we see his hands playing something different.
Audio problem: When Tori says "something was rubbing my leg" her mouth doesn't move in the shot when she says "my leg." (00:30:30)
Audio problem: When Henry is at bat, his mother is berating the pitcher. She starts saying you stupid mother... and it cuts to Gary Busey completing the sentence. He says "God damn," but his mouth doesn't match. Chances are he said the f-word but it was changed in post for ratings issues.
Audio problem: When Daniel and Jack are driving around looking for where the "bad guys" are you can hear their voices echoing when they are still sitting in the car indicating that it was rerecorded. (00:40:50)