Character mistake: When the elder Vulcans inform young Spock of the death of the older Spock, they show him a tablet that has him listed as "Second Officer - USS Enterprise." Spock was First Officer.
Star Trek Beyond (2016)
Directed by: Justin Lin
Starring: Idris Elba, Simon Pegg, Chris Pine, Karl Urban, Zoe Saldana, Zachary Quinto, Sofia Boutella
Other mistake: When the saucer of the Enterprise finally crashes, all sorts of dust comes into the bridge through the big window at the front. Two mistakes here: 1. The very next shot shows that the dust cloud never actually reaches up to the bridge (which is in the middle of the saucer) and 2. Later in the movie, Kirk and Chekov escape the bridge, but to do so, they need to shoot the window out. So the dust couldn't have got in even if it had reached the bridge. Which it didn't. (00:32:25 - 00:51:30)
Suggested correction: The dust and debris seen isn't from hitting the dirt or ground. It came before when the saucer was crashing through the mountains and you see the entire top of the saucer covered in dust. But the debris didn't have to come from a window that was later shot out. It could have come from other widows or hull breaches, not to mention the fact that what we see is probably the interior of the ship itself.
Other mistake: When Krall boards the Enterprise, he lands his ship in the top of the saucer, but then later, Uhura separates the saucer from the neck of the ship with both her and Krall still inside it. And then when they are back on the planet's surface, they arrive there in Krall's very recognizable three-nacelled ship, whereas all of the other ships from that fleet only have two nacelles.
Suggested correction: The other ships were also taking Enterprise crew members, so there's no reason to think whoever was left to pilot Krall's ship couldn't pick up Krall and Uhura.
Trivia: USS Yorktown was the name of the central starship in the original pilot submitted to NBC in 1964 by Gene Roddenberry. Yorktown is the name of the space station in Star Trek Beyond.
Question: When Chekov and Kirk step into their escape pods while on the Enterprise there are wearing their yellow uniforms, but when arriving on the planet they step out of the escape pods and are now wearing a completely different outfit. All of the other crew that used escape pods have not changed outfits. Where did they get the new clothes from?
Chosen answer: The outfits were in the escape pods they escaped in. The other crew members didn't change outfits because they were all captured and were unable to. Chekov and Kirk were not captured and were also the only crew on board who successfully escaped in the designated escape pods, so logically they would be the only people wearing different outfits.
Question: McCoy joins Kirk for a drink, revealing a bottle he found in Chekov's locker. Firstly, what was he doing in Chekov's locker? Secondly, what's with the two of them clinking glasses with a third drink? The locker and the clinking might suggest Chekov was dead, as they might have to fill in if Anton Yelchin had died before filming was complete, but that's not what happened. Chekov is very much alive in the next scene.
Chosen answer: Why Bones might have been going through Chekov's locker is addressed in another answer. The third glass is not for Chekov - who, as you point out, is alive - it's in memory of Jim's dad, George Kirk, who (as Bones mentions in this scene and as shown in Star Trek 2009) died on the same day Jim was born. Because of this fact, Jim's birthday always reminds him of his dad's death, so they pour a glass, and raise a toast, in his honour every year.
The director reportedly said the 3rd glass was a late addition. Perhaps it can serve both purposes, the scripted intention as well as a subtle tribute. See #7 in https://www.empireonline.com/movies/features/star-trek-beyond-justin-lin-simon-pegg/.
Question: If the characters are younger versions of the original crew, why does the picture young Mr. Spock views when he is told that ambassador Spock has died include all of the original crew members? Who are they supposed to be?
Answer: Those are the personal effects of the old/original Spock. He lived a full life with the original Enterprise crew, as documented in the TV shows and movies, then came back in time to the new/altered timeline.
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