Dr. Daniel Goodman: That is not a tuxedo, Dr. Hodgins.
Dr. Jack Hodgins: I am not going, Dr. Goodman.
Dr. Daniel Goodman: You are going.
[places name tag in Dr. Hodgins' pocket]
Dr. Daniel Goodman: When we arrive the donors will all be wearing name tags.
Zack Addy: What do we talk about?
Dr. Daniel Goodman: Your work, of course.
Angela Montenegro: Zack's work consists of removing flesh from corpses. Hodgins dissects bugs that have been eating people's eyeballs.
Dr. Jack Hodgins: Leave me out of it - I am not going.
Dr. Daniel Goodman: And how do you see your job?
Angela Montenegro: [sighs] I draw death masks.
Dr. Daniel Goodman: Is that really how you see it?
Angela Montenegro: Don't you?
Dr. Daniel Goodman: You are the best of us, Miss Montenegro. You discern humanity in the wreck of a ruined human body. You give victims back their faces - their identities. You remind us all of why we're here in the first place - because we treasure human life.
[Angela hugs Dr. Goodman]
Dr. Daniel Goodman: Oh, for God's sake.
Dr. Temperance Brennan: What happened?
Zack Addy: Apparently all Angela needed was to hear her job description in a deep African-American tone.
The position of the bodies and in particular the arms of the two dead, corrupt FBI agents bear a remarkable resemblance to a full size painting that appears in Angela's throughout the first season and most of the second season of Bones - body upright, upper arms outstretched and forearms pointing down at a right angles. See more...
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Updates: 
Series 3
Factual error: In the season 5 episode titled "Night at the Bones Museum", Hodges makes a remark about the mummy wrappings being for an important person because it is a diamond weave pattern. However, the diamond weave pattern didn't come into effect until the Greco-Roman period that began at 332 B.C. It certainly wouldn't be found in an 18th dynasty mummy, no matter how important he was.
Continuity: Episode 4-18, "The Science in the Physicist": when Bones and Booth get trapped in the resonance chamber, the position of Booth's hands over his ears changes back and forth between shots.
Continuity: In the episode "The Man in the Fallout Shelter," Hodgins is talking to Bones and says something about Goodman not being able to see his family and Zach not being able to see his kids. Goodman has kids, Zach was going to visit his family, not the other way around.
Plot hole: At first the victim (Careful Lionel) is described as not returning to pick up his new shirt in November 1958, and possessing love letters dated from 1957 through early winter (November) 1958. Booth reports the fallout shelter where Lionel's body was discovered was sealed in 1958. Later Lionel is described as reported missing by his boss in January 1960, and the illegitimate child he fathered was born in 1960 as well. That would mean his boss didn't notice he was gone for over a year, and his pregnant girlfriend was with child for at least 14 months.
Continuity: Season 5, Ep 1: Bones is stabbed in the arm by the doctor she is pursuing. There is so much blood that Booth is covered in blood when he is in his office. Later in the episode Bones has a short sleeve top on and has no bandage, plaster or sign of a cut.
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