Continuity: When Turk operates on JD he cuts open the left side of his abdomen. However, when JD is in recovery the bandage is on the right side of his abdomen.
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Quotes
Turk: This guy needs brain work, this guy needs a heart...
JD: This one needs courage.
Turk: Helping or hurting, JD? Helping or hurting?
Trivia
The scene in which Matthew Perry chases JD with a remote control plane is a play on the famous Alfred Hitchcock movie North by Northwest, in which Cary Grant is chased through a field by a biplane. See more...
Scrubs (2001) - 2 mistakes in "My Day Off"
starring Donald Faison, John C. McGinley, Judy Reyes, Ken Jenkins, Neil Flynn, Sarah Chalke, Zach Braff (add more)
Updates: 
Series 6
My Day Off (season 1, episode 9)
Continuity: At the end when they are in the bar, Dr Cox asks for 5 shot glasses, the camera cuts to JD and then back to Dr Cox. The glasses have been filled, but not enough time has passed for all 5 to have been done.
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