Continuity: When Spartan and Phoenix are fighting in the sewers, Edgar Friendly shoots his gun at Phoenix and you see the catwalk that Phoenix was on tip to its side and Phoenix dropping down to the ground with the plank of the catwalk right below him. When Phoenix lands on the ground the plank is nowhere to be seen. It should have been right below him.

Continuity: When Spartan and Huxley arrive at the cryogenics place to battle Phoenix, Phoenix sees them on the monitor walking into the building and you see Spartan on the left and Huxley on the right. The camera angle changes to an inside view and Spartan is now on the right.

Continuity: When Spartan switches seats with Huxley in the police car, the outside shot shows him get into the back seat. When the shot switches to Huxley in the driver's seat, we can see the back and Spartan isn't seen anywhere in the car.

Continuity: When Spartan slams the Cryogenic pill on the ground he is about 3 feet in front of Phoenix, but when you see him jump up to grab the claw, he is seen much farther away.